Here is a list of all functions, variables, defines, enums, and typedefs with links to the files they belong to:

- p -

• PAIRDIST_KTUPLE : pair_dist.h
• PAIRDIST_SQUIDID : pair_dist.h
• PAIRDIST_SQUIDID_KIMURA : pair_dist.h
• PAIRDIST_UNKNOWN : pair_dist.h
• PairDistances() : pair_dist.c , pair_dist.h
• PermutationArray() : util.h , util.c
• PrepareAlignment() : hhalign_wrapper.c
• PRINT_CLUSTER_DISTRIBUTION : mbed.c
• PRINT_TAIL : clustal-omega.c
• PrintAlnOpts() : clustal-omega.h , clustal-omega.c
• PrintLongVersion() : clustal-omega.c , clustal-omega.h
• PRNT_NODE : tree.h
• ProgressDone() : progress.h , progress.c
• ProgressLog() : progress.h , progress.c